USING OXFORD-RCGP RSC FOR OBSERVATIONAL STUDIES

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The Oxford-RCGP RSC has a current membership of over 1600 general practices in England covering approximately 8 million patients who are broadly representative of the English general population. The emergent COVID-19 pandemic has seen a rapid increase in the number of new practices joining the network to support the national surveillance program.

The Oxford-RCGP RSC team transforms routine clinical data from individual patient records at practice level into an accessible repository of data for health research. Data is transformed to series of themed datasets readily available research. These datasets include standard RSC population configuration (based on age band, ethnicity, index of multiple deprivation, and rurality), clinical case definitions (generally ontological), covariates, and outcomes. These are benchmarked to ONS standard populations to enable rapid comparisons between the study and national populations.

How to access RCGP RSC data

RCGP RSC data is available for researchers interested in conducting primary care/ linked data studies. To work with us, please download and complete the data request form (below) and email to [email protected]

We would also need :

a protocol, clearly defining the purpose of the request and use of dataa list of variables (no abbreviations for the medical terms)ethics approval (evidence if such is not needed – for what evidence you can present, please refer to the guidance notes on the form).

Once processed the request is assigned a reference number and added to the log. It is then scheduled for consideration at the weekly technical meeting and monthly RSC Operational meeting. The official approval happens at the fourth Wednesday of each month when the RCGP RSC operational meeting is held.

DATA REQUEST FORMOxford-RCGP RSC Theme datasetsThe Oxford-RCGP RSC team is developing a series of themed datasets that will allow researchers rapid access to theme specific datasets that can be used for research studies. We offer standard protocols that can be modified to cater to the needs of specific research studies.

These datasets can be linked to other data sources and prepared according a data structure that fits the analytical requirements of the proposed study.Our currently planned themes (at different stages of development) are given below. Explore our theme datasets which are ready for research studies by clicking on the buttons on the right.

  • EXPLORE OUR THEME DATASETS
  • CARDIOVASCULAR & DIABETES
  • CANCER
  • SURVEILLANCE & ACUTE PATHWAYS
  • MENTAL HEALTH

How we develop phenotypes and ontologies to support theme datasets
We start theme development by forming a group of theme experts led by a theme lead. The theme lead will design the theme dataset based on the common requirements for the research theme.

The theme lead populates a theme template based on expert knowledge (or study requirement, if the theme is initially focused on producing a dataset for a study). The theme lead then works with a team of code curators to convert the data requirements of a in to a clinical code specification.

This is carried out as a two stage approach (click on the links on the right to learn more). The outputs of the code curation process are stored in a code repository in the secure environment. The codes committed to the code repository are immediately available to be used for data extraction. The code repository is capable of updating automatically to reflect to most code changes in future SNOMED CT releases.LEARN MORE ABOUT STAGE 1 PROCESS

LEARN MORE ABOUT STAGE 2 PROCESSImageSystems involved in the theme development process Image SNOMED CT Code Tool Theme leads and clinicians (with expertise in the theme) use the SNOMED CT code tool developed by the Oxford-RCGP RSC team to curate variables/codes within each theme.

ImageVIEW SCREENSHOTTRAINING FOR CURATORS Cardiovascular & Diabetes Theme General inclusions/exclusions and population covariatesPeople will be included in cohorts who have a least one year’s historic data in their records.
Age will be represented as year or birth

Ethnicity will be listed in five categories (we can conduct multiple imputation for missing data)
IMD provided at LSOA level to individual records, derived from postcode. Where missing we substitute the practice cohort. Plus provided in quintiles (quintile 1 most deprived)
Household size (N.B. Relies on identical address & registered with same practice)
Urban, town and city, conurbation (ONS population density)
NHS Region – North, Midlands and East, South and London.
Registration will be full registration and not include temporary residents
We will include a practice indicator
We will exclude records where: no valid age or gender, no agreement to share data (approx. 0.2%)
CVD THEME TEMPLATE
(NEXUS 365 ACCESS REQUIRED)
RAG ConditionID Category ConditionName VariableType OutputType Comment Available
2044 PHENOTYPE TIA
2064 PHENOTYPE AsthmaDiagnosis
95 PHENOTYPE Chronic Kidney Disease
1500 INVESTGATION eGFR
2065 EXPOSURE ActiveSmoker
2066 EXPOSURE Ex-smoker
2018 PHENOTYPE AcuteMyocardialInfarction Case finding Dichotomous Strong evidence of myocardial infarct ever – not just acute
2011 PHENOTYPE IschaemicStroke
2050 INVESTGATION HbA1c
1512 INVESTGATION CRP_normal
1513 INVESTGATION CRP_numeric
1514 INVESTGATION LFT_ALT
1516 INVESTGATION DMARD
1517 INVESTGATION AntiCoagMonitor
1518 INVESTGATION INRMonitor_num
1519 OUTCOME COVID-19Shielded
1515 INVESTGATION LFT_AST
1520 EXPOSURE Temperature
2047 PHENOTYPE Diabetes T1
2048 PHENOTYPE Diabetes T2
2046 INVESTGATION Random Blood Glucose
2049 INVESTGATION Fasting Blood Glucose
1522 INVESTGATION HbA1c_IFCC
1523 INVESTGATION HbA1c_DCCT
1524 INVESTGATION HbA1c_Unspecified
1525 PHENOTYPE PeriphVascDiseaseLeg
1526 PHENOTYPE ChronicLungDisease
1521 EXPOSURE Fever
2067 EXPOSURE Non-Smoker
2010 PHENOTYPE Hypertension
2054 INVESTGATION HDL cholesterol
2055 INVESTGATION LDL cholesterol
2041 PHENOTYPE RheumatoidArthritis
1511 INVESTGATION CRP_elevated
2021 PHENOTYPE Angina
100 EXPOSURE Body Mass Index
2031 PHENOTYPE CongestiveCardiacFailure
105 EXPOSURE Height
2056 INVESTGATION Total cholesterol
2148 INVESTGATION Creatinine
1510 OUTCOME COVID-19TimeICU
2051 EXPOSURE Blood Pressure – Both
2052 EXPOSURE Blood Pressure – Diastolic
2053 EXPOSURE Blood Pressure – Systolic
2147 PHENOTYPE Chronic Kidney Disease – Stages 3 to 5
2133 PHENOTYPE COPDDiagnosis
2126 COPDProcessOfCare
2149 INVESTGATION PCR
2008 PHENOTYPE HaemorrhagicStroke
2144 INVESTGATION ACR
2025 PHENOTYPE AtrialFibrillation
2045 PHENOTYPE UnstableAngina
110 EXPOSURE Weight
1501 INVESTGATION PlateletCount
1502 INVESTGATION BMICat_normal
3160 PHENOTYPE IschemicHeartDiseaseJS
4580 OUTCOME FindingOfDecreaseInAppetite Case finding Dichotomous Curated for use as Adverse Event Indicator
1503 INVESTGATION BMICat_obese
1504 INVESTGATION BMICat_Overwt
1505 INVESTGATION BMICat_Severeobesity
1506 OUTCOME COVID19HospDisch
1507 OUTCOME COVID-19HospAttempt
1508 OUTCOME COVID-19MechVent
1509 OUTCOME COVID-19OxygenRxAttempt
4204 OUTCOME AsthmaExacerbation Case finding Dichotomous
4210 EXPOSURE AsthmaManagementNoPlan Case finding Dichotomous
4208 EXPOSURE AsthmaReview Case finding Dichotomous
4209 EXPOSURE AsthmaManagementPlan Case finding Dichotomous
4660 OUTCOME FindingOfHaemolysis Case finding Dichotomous Curated for use as Adverse Event Indicator
4661 OUTCOME HaemolyticAnaemia Case finding Dichotomous Curated for use as Adverse Event Indicator
4662 OUTCOME Agranulocytosis Case finding Dichotomous Curated for use as Adverse Event Indicator
4663 OUTCOME AplasticAnaemia Case finding Dichotomous Curated for use as Adverse Event Indicator
4664 OUTCOME BoneMarrowDepression Case finding Dichotomous Curated for use as Adverse Event Indicator
4665 OUTCOME FindingOfLeucopenia Case finding Dichotomous Curated for use as Adverse Event Indicator
4666 OUTCOME FindingOfNeutropenia Case finding Dichotomous Curated for use as Adverse Event Indicator
4667 OUTCOME ThrombocytopenicDisorder Case finding Dichotomous Curated for use as Adverse Event Indicator
4668 OUTCOME Stevens-JohnsonSyndrome Case finding Dichotomous Curated for use as Adverse Event Indicator
4669 OUTCOME LyellSyndrome Case finding Dichotomous Curated for use as Adverse Event Indicator
4670 OUTCOME DrugReactionWithEosinophiliaAndSystemicSymptoms Case finding Dichotomous Curated for use as Adverse Event Indicator
4671 OUTCOME ErythemaMultiforme Case finding Dichotomous Curated for use as Adverse Event Indicator
4672 OUTCOME ItchingOfSkin Case finding Dichotomous Curated for use as Adverse Event Indicator
4673 OUTCOME Henoch-SchonleinPurpura Case finding Dichotomous Curated for use as Adverse Event Indicator
4674 OUTCOME ToxicLiverDisease Case finding Dichotomous Curated for use as Adverse Event Indicator
4675 OUTCOME ChoestaticJaundiceSyndrome Case finding Dichotomous Curated for use as Adverse Event Indicator
4676 OUTCOME HepaticFailure Case finding Dichotomous Curated for use as Adverse Event Indicator
4677 OUTCOME FindingOfAbdominalPain Case finding Dichotomous Curated for use as Adverse Event Indicator
4678 OUTCOME ClostridiumDifficileDiarrhoea Case finding Dichotomous Curated for use as Adverse Event Indicator
4679 OUTCOME Pancreatitis Case finding Dichotomous Curated for use as Adverse Event Indicator
4680 OUTCOME Oesophagitis Case finding Dichotomous Curated for use as Adverse Event Indicator
4681 OUTCOME UlcerOfOesphagus Case finding Dichotomous Curated for use as Adverse Event Indicator
4682 OUTCOME Angioedema Case finding Dichotomous Curated for use as Adverse Event Indicator
4683 OUTCOME FindingOfCloudedConsciousness Case finding Dichotomous Curated for use as Adverse Event Indicator
4684 OUTCOME Delirium Case finding Dichotomous Curated for use as Adverse Event Indicator
4685 OUTCOME FindingOfExtraPyramidalMovements Case finding Dichotomous Curated for use as Adverse Event Indicator
4686 OUTCOME FindingOfHallucinations Case finding Dichotomous Curated for use as Adverse Event Indicator
4687 OUTCOME FindingOfPsychomotorAgitation Case finding Dichotomous Curated for use as Adverse Event Indicator
4688 OUTCOME BenignIntracranialHypertension Case finding Dichotomous Curated for use as Adverse Event Indicator
4689 OUTCOME FindingOfTinnitus Case finding Dichotomous Curated for use as Adverse Event Indicator
4690 OUTCOME BacterialVaginosis Case finding Dichotomous Curated for use as Adverse Event Indicator
4691 OUTCOME Pericarditis Case finding Dichotomous Curated for use as Adverse Event Indicator
4581 OUTCOME FindingOfDiarrhoea Case finding Dichotomous Curated for use as Adverse Event Indicator
4582 OUTCOME FindingOfNausea Case finding Dichotomous Curated for use as Adverse Event Indicator
4205 EXPOSURE AsthmaPrescribedInhaledCorticosteriods
4583 OUTCOME FindingOfVomiting Case finding Dichotomous Curated for use as Adverse Event Indicator
4588 OUTCOME FindingOfHeadache Case finding Dichotomous Curated for use as Adverse Event Indicator
4608 OUTCOME Anaphylaxis Case finding Dichotomous Curated for use as Adverse Event Indicator
4206 EXPOSURE AsthmaPrescribedOralCorticosteriods
4207 OUTCOME AccidentAndEmergencyDepartmentAttended
Cancer Theme
General inclusions/exclusions and population covariates:

People will be included in cohorts who have a least one year’s historic data in their records.
Age will be represented as year or birth
Ethnicity will be listed in five categories (we can conduct multiple imputation for missing data)
IMD provided at LSOA level to individual records, derived from postcode. Where missing we substitute the practice cohort. Plus provided in quintiles (quintile 1 most deprived)
Household size (N.B. Relies on identical address & registered with same practice)
Urban, town and city, conurbation (ONS population density)
NHS Region – North, Midlands and East, South and London.
Registration will be full registration and not include temporary residents
We will include a practice indicator
We will exclude records where: no valid age or gender, no agreement to share data (approx. 0.2%)
CANCER THEME TEMPLATE
(NEXUS 365 ACCESS REQUIRED)
RAG ConditionID Category ConditionName VariableType OutputType Comment Available
G 4204 PHENOTYPE AsthmaExacerbation Case finding Dichotomous
G 4210 PHENOTYPE AsthmaManagementNoPlan Case finding Dichotomous
G 4209 PHENOTYPE AsthmaManagementPlan Case finding Dichotomous
G 4208 PHENOTYPE AsthmaReview Case finding Dichotomous
G 1509 COVID-19OxygenRxAttempt
G 1508 COVID-19MechVent
G 1507 COVID-19HospAttempt
G 1506 COVID19HospDisch
G 1505 BMICat_Severeobesity
G 1504 BMICat_Overwt
G 1503 BMICat_obese
4006 cancer_tests_CT_chest
4004 cancer_tests_CT_abdo
3051 cancer_tests_CTPelvis
4005 cancer_tests_CTscan_AllSites
4022 cancer_tests_SerumLDH
4020 PHENOTYPE cancer_groups_EyeAndOrbit_total
3090 PHENOTYPE cancer_groups_eye
4019 PHENOTYPE cancer_groups_CNSwho_Neuronal_MixedNeuronalGlial
4015 PHENOTYPE cancer_groups_CNSwho_Ependymoma
4014 PHENOTYPE cancer_groups_CNSwho_Pineal
4013 PHENOTYPE cancer_groups_CNSwho_TumoursSpinalParaspinalNerves
4010 PHENOTYPE cancer_groups_CNSwho_meningioma_III
4008 PHENOTYPE cancer_groups_CNSwho_meningioma_I
4002 cancer_tests_CTHead
G 1502 BMICat_normal
G 1501 PlateletCount
G 110 Weight
G 2008 HaemorrhagicStroke
G 1510 COVID-19TimeICU
1530 PHENOTYPE cancer_groups_colon_total
3076 PHENOTYPE cancer_groups_melanoma
3061 PHENOTYPE cancer_groups_oesophagus
1535 PHENOTYPE cancer_groups_pancreas_InSitu
3001 cancer_symptoms_apetite_loss
3015 cancer_symptoms_dysphagia
3045 cancer_symptoms_weight_loss
3042 cancer_symptoms_splenomegaly
3000 cancer_2ww_referrals_
1541 cancer_2ww_referrals_urol
1542 cancer_2ww_referrals_UpperGI
1543 cancer_2ww_referrals_Skin
1544 cancer_2ww_referrals_Sarcoma
1545 cancer_2ww_referrals_Lung
1546 cancer_2ww_referrals_HeadNeck
1547 cancer_2ww_referrals_HaemMalig
1548 cancer_2ww_referrals_Gynae
1549 cancer_2ww_referrals_Colorectal
1550 cancer_2ww_referrals_Breast
1551 cancer_2ww_referrals_LowerGI
1552 cancer_2ww_referrals_Braincancer
1553 PHENOTYPE cancer_groups_bladder_InSitu
3089 PHENOTYPE cancer_groups_bladder
1554 PHENOTYPE cancer_groups_bladder_Total
3083 PHENOTYPE cancer_groups_choriocarcinoma
1555 PHENOTYPE cancer_groups_prostateCa_InSitu
1556 PHENOTYPE cancer_groups_prostateCa_Total
1557 PHENOTYPE cancer_groups_prostateCa_Primary
1558 PHENOTYPE cancer_groups_ovarian_total
3082 PHENOTYPE cancer_groups_ovarian
1559 PHENOTYPE cancer_groups_endometrial_InSitu
1560 PHENOTYPE cancer_groups_endometrial_total
3081 PHENOTYPE cancer_groups_endometrial
3079 PHENOTYPE cancer_groups_vulval
3047 cancer_tests_ca125
3032 cancer_symptoms_nausea
3027 cancer_symptoms_lymphaneck
4018 PHENOTYPE cancer_groups_CNSwho_SellarRegion
4012 PHENOTYPE cancer_groups_CNSwho_Embryonal
4064 cancer_tests_sigmoidoscopy_result_normal
4063 cancer_tests_sigmoidoscopy_result_abnormal
4062 cancer_tests_sigmoidoscopy
4058 cancer_tests_ESR_ObEntity
4057 cancer_tests_ESR_procedure
4054 cancer_tests_platelets_ObEntity
4053 cancer_tests_platelets_procedure
4050 cancer_tests_WhiteCellCount_ObEntity
4052 cancer_tests_lymphocyteCount_ObEntity
4051 cancer_tests_LymphocyteCount_procedure
4049 cancer_tests_WhiteCellCount_procedure
4047 cancer_groups_rectumJS_total
4046 cancer_groups_Small_Intestine_total
4043 cancer_groups_stage_WHOcns_IV
4041 cancer_groups_stage_WHOcns_II
4040 cancer_groups_stage_WHOcns_I
4059 DiagnosisDeath_QualValue
4039 cancer_tests_mammogram_result_Abnormal
4037 cancer_tests_mammogram
4036 cancer_tests_USSpelvis
4035 cancer_tests_USSabdoJS_Normal
3059 cancer_tests_USSabdo
4030 cancer_tests_PSAJS_result_Normal
4028 cancer_tests_chest_xrayJS_abnormal
4026 cancer_tests_CT_resultNormal
4024 cancer_tests_brain_MRIJS_abnormal
3046 cancer_tests_brain_MRI
4177 cancer_tests_colposcopy_abnormal
4178 cancer_tests_colposcopy_normal
4176 cancer_tests_colposcopy_procedure
4175 cancer_tests_PapSmear_result_abnormal
4170 cancer_tests_HPVTest_result_positive
4167 cancer_screen_breast_DNA_DidNotRespond
4163 cancer_screen_breast_MRI_procedure
4164 cancer_screen_breast_mammogram_procedure
4158 cancer_screen_bowel_sigmoidoscopy_FurtherInvest
4160 cancer_screen_bowel_sigmoidoscopy_normal
4155 cancer_screen_bowel_DNA_DidNotRespond
4145 cancer_tests_FOB_procedure_NonScreening
4152 cancer_screen_bowel_FIT_normal
4146 cancer_screen_bowel_FIT_result_ObEntity
4143 cancer_tests_FOB_NonScreening_result_normal
4135 cancer_tests_cystoscopy_procedure
4127 cancer_tests_MCV_ObEntity
4126 cancer_tests_MCV_procedure
4061 cancer_tests_colonoscopy_result_normal
3049 cancer_tests_colonoscopy
4060 cancer_tests_colonoscopy_result_abnormal
4056 cancer_tests_CRP_ObEntity
4055 cancer_tests_CRP_procedure
4048 cancer_groups_rectum_InSitu
4044 cancer_groups_stage_TNM_ObEntity
4042 cancer_groups_stage_WHOcns_III
4038 cancer_tests_mammogram_result_Normal
4034 cancer_tests_USSabdoJS_Abnormal
4032 cancer_tests_ca125JS_procedure
4031 cancer_tests_PSAJS_result_ObEntity
4029 cancer_tests_PSAJS_result_Abormal
3057 cancer_tests_PSA
4027 cancer_tests_chest_xrayJS_normal
3048 cancer_tests_chest_xray
4025 cancer_tests_CT_resultAbnormal
4023 cancer_tests_brain_MRIJS_normal
4174 cancer_tests_PapSmear_result_normal
4173 cancer_tests_PapSmear_result_ObEntity
4172 cancer_tests_PapSmear_procedure
4171 cancer_tests_HPVTest_result_negative
4169 cancer_tests_HPVTest_result_ObEntity
4168 cancer_tests_HPVTest_procedure
4162 cancer_diagnosis_BreastCancer_screening
4166 cancer_screen_breast_result_normal
4165 cancer_screen_breast_result_abnormal
4159 cancer_screen_bowel_sigmoidoscopy_cancer_detected
4153 cancer_screen_bowel_FIT_Abnormal
4144 cancer_tests_FOB_NonScreening_result_ObEntity
4142 cancer_tests_FOB_NonScreening_result_abnormal
4141 cancer_screen_bowel_FOB_result_ObEntity
4140 cancer_screen_bowel_FOB_abnormal
4139 cancer_screen_bowel_FOB_normal
4138 cancer_screen_bowel_FOB_procedure
4137 cancer_tests_cystoscopy_result_abnormal
4136 cancer_tests_cystoscopy_result_normal
4134 cancer_tests_OGD_result_abnormal
4133 cancer_tests_OGD_result_normal
4132 cancer_tests_oesophagogastroduodenoscopyOGD
4131 cancer_tests_VitD3_ObEntity
4130 cancer_tests_VitD3_procedure
4129 cancer_tests_MCH_ObEntity
4128 cancer_tests_MCH_procedure
4125 cancer_tests_haemoglobin_ObEntity
4124 cancer_tests_haemoglobin_procedure
4123 cancer_symptoms_MicroscopicHaematuria
3065 cancer_groups_rectum
4045 cancer_groups_Small_Intestine_primary
4033 cancer_tests_serumprotein_electroJS_procedure
4161 cancer_diagnosis_BowelCancer_screening
4154 cancer_screen_bowel_sigmoidoscopy_procedure
1561 PHENOTYPE cancer_groups_renal_InSitu
1563 PHENOTYPE cancer_groups_renal_Total
1565 cancer_symptoms_NonCardiac_Chest_Pain
1566 cancer_symptoms_UrinaryUrgency
1567 cancer_symptoms_UrinaryFrequency
3022 cancer_symptoms_infectrecur
3021 cancer_symptoms_ida
1571 cancer_symptoms_ChangeBowelHabit
1570 PHENOTYPE cancer_groups_T0_pTis_InSitu
1573 PHENOTYPE cancer_groups_FIGO_Stage3
1575 PHENOTYPE cancer_groups_FIGO_Stage1
1576 PHENOTYPE cancer_groups__Stage_M1
1579 PHENOTYPE cancer_groups__Stage_T3
1580 PHENOTYPE cancer_groups__Stage_T2
1581 PHENOTYPE cancer_groups__Stage_T1
1582 PHENOTYPE cancer_groups__Stage_N4
1587 PHENOTYPE cancer_groups__Dukes_A
1588 PHENOTYPE cancer_groups__Dukes_B
1589 PHENOTYPE cancer_groups__Dukes_C
1590 PHENOTYPE cancer_groups__Dukes_D
3078 PHENOTYPE cancer_groups_breast
1591 PHENOTYPE cancer_groups_breast_InSitu
3072 PHENOTYPE cancer_groups_lung
1593 PHENOTYPE cancer_groups_lung_InSitu
1594 PHENOTYPE cancer_groups_lung_Total
1595 PHENOTYPE cancer_symptoms_breast_SkinNippleChanges
1597 PHENOTYPE cancer_symptoms_UrinaryTractInfection
3011 PHENOTYPE cancer_symptoms_diarrhea
3075 PHENOTYPE cancer_groups_osteo
3084 PHENOTYPE cancer_groups_penis
3067 PHENOTYPE cancer_groups_hepato
1603 PHENOTYPE cancer_groups__Leukaemia_Other
1604 PHENOTYPE cancer_groups__Leukaemia_Total_Overarching
1605 PHENOTYPE cancer_groups__Leukaemia_CLL
1607 PHENOTYPE cancer_groups__Leukaemia_ALL
1608 PHENOTYPE cancer_groups__Leukaemia_AML
1609 PHENOTYPE cancer_groups_NonHodgkinsLymphoma
1610 PHENOTYPE cancer_groups_HodgkinsLymphoma
1612 PHENOTYPE cancer_groups_testicular_InSitu
1613 PHENOTYPE cancer_groups_testicular_Total
3086 PHENOTYPE cancer_groups_testicular
1614 diagnosis_basedonDeathCert_Autopsy
G 1614 diagnosis_basedonDeathCert_Autopsy
1615 referrals_2ww_AllCancers_seen
1616 referrals_2ww_Urological_seen
1617 referrals_2ww_UpperGI_seen
1618 referrals_2ww_Skin_seen
1619 referrals_2ww_Sarcoma_seen
1620 referrals_2ww_Lung_seen
1621 referrals_2ww_HaemMalig_seen
1622 referrals_2ww_Gynae_seen
1623 referrals_2ww_ColoRectal_seen
1625 referrals_2ww_BrainCancer_seen
1626 referrals_2ww_HeadNeck_seen
3068 PHENOTYPE cancer_groups_gallbladder
3071 PHENOTYPE cancer_groups_peritoneum
1629 PHENOTYPE cancer_groups_peritoneum_Total
3058 PHENOTYPE cancer_tests_serumprotein_electro
4017 PHENOTYPE cancer_groups_CNSwho_mesenchymal
4016 PHENOTYPE cancer_groups_CNSwho_ChoroidPlexus
4011 PHENOTYPE cancer_groups_CNSwho_AstrocyticOligodendroglial
4007 PHENOTYPE cancer_groups_CNSwho_meningioma_all
4009 PHENOTYPE cancer_groups_CNSwho_meningioma_II
3088 PHENOTYPE cancer_groups_renal
1562 cancer_symptoms_Test_Scrotum_Pain
3035 cancer_symptoms_painback
3012 cancer_symptoms_distension
3010 cancer_symptoms_cough
1564 cancer_symptoms_Test_Scrotum_Mass
1568 cancer_symptoms_Nocturia
1569 cancer_symptoms_Retention
3016 cancer_symptoms_dysuria
3041 cancer_symptoms_sob
1572 PHENOTYPE cancer_groups_FIGO_Stage4
1574 PHENOTYPE cancer_groups_FIGO_Stage2
1577 PHENOTYPE cancer_groups__Stage_M0
1578 PHENOTYPE cancer_groups__Stage_T4
1583 PHENOTYPE cancer_groups__Stage_N3
1584 PHENOTYPE cancer_groups__Stage_N2
1585 PHENOTYPE cancer_groups__Stage_N1
1586 PHENOTYPE cancer_groups__Stage_N0
1596 cancer_symptoms_breast_Pain
1592 PHENOTYPE cancer_groups_breast_Total
3066 PHENOTYPE cancer_groups_anal
1598 PHENOTYPE cancer_groups_anal_Total
1599 PHENOTYPE cancer_groups_Bone_Total
1600 PHENOTYPE cancer_groups_penis_total
1601 PHENOTYPE cancer_groups_hepato_InSitu
1602 PHENOTYPE cancer_groups_hepato_Total
1606 PHENOTYPE cancer_groups__Leukaemia_CML
1611 PHENOTYPE cancer_groups_SpermaticCord_Total
3087 PHENOTYPE cancer_groups_spermatic cord
1624 referrals_2ww_Breast_seen
1627 PHENOTYPE cancer_groups_gallbladder_InSitu
1628 PHENOTYPE cancer_groups_gallbladder_Total
G 105 Height
100 Body Mass Index
3070 PHENOTYPE cancer_groups_pancreas
G 1511 CRP_elevated
3080 cancer_groups_cervical
3009 cancer_symptoms_constipation
G 1521 Fever
1527 PHENOTYPE cancer_groups_cervical_InSitu_CIN3
1528 PHENOTYPE cancer_groups_cervical_total
1529 PHENOTYPE cancer_groups_colon_InSitu
3064 PHENOTYPE cancer_groups_colon
1531 PHENOTYPE cancer_groups_melanoma_InSitu
1532 PHENOTYPE cancer_groups_myeloma_MGUS
3098 PHENOTYPE cancer_groups_myeloma
1533 PHENOTYPE cancer_groups_oesophagus_Barretts_InSitu
1534 PHENOTYPE cancer_groups_oesophagus_total
1536 PHENOTYPE cancer_groups_pancreas_total
3095 PHENOTYPE cancer_groups_secondary_malignancy
3062 PHENOTYPE cancer_groups_stomach
1537 PHENOTYPE cancer_groups_stomach_InSitu
1538 PHENOTYPE cancer_groups_stomach_total
3024 cancer_symptoms_lumpbreast
3008 cancer_symptoms_clubbing
3036 cancer_symptoms_painbone
G 1520 Temperature
G 1515 LFT_AST
G 1519 COVID-19Shielded
G 1514 LFT_ALT
G 1513 CRP_numeric
G 1512 CRP_normal
G 2011 IschaemicStroke
G 2018 AcuteMyocardialInfarction Case finding Dichotomous Strong evidence of myocardial infarct ever – not just acute
3017 cancer_symptoms_fatigue
3019 cancer_symptoms_haematuria
3020 cancer_symptoms_hoarse
3023 cancer_symptoms_jaundice
3026 cancer_symptoms_lymphaden
3028 cancer_symptoms_massabdo
3038 cancer_symptoms_painupabdo
1539 cancer_symptoms_postmenopausal_bleeding
3040 cancer_symptoms_reflux
1540 cancer_symptoms_vaginaldischarge
3034 cancer_symptoms_painabdom
Surveillance & acute pathways of care theme
General inclusions/exclusions and population covariates:

People will be included in cohorts who have a least one year’s historic data in their records.
Age will be represented as year or birth
Ethnicity will be listed in five categories (we can conduct multiple imputation for missing data)
IMD provided at LSOA level to individual records, derived from postcode. Where missing we substitute the practice cohort. Plus provided in quintiles (quintile 1 most deprived)
Household size (N.B. Relies on identical address & registered with same practice)
Urban, town and city, conurbation (ONS population density)
NHS Region – North, Midlands and East, South and London.
Registration will be full registration and not include temporary residents
We will include a practice indicator
We will exclude records where: no valid age or gender, no agreement to share data (approx. 0.2%)
RAG ConditionID Category ConditionName VariableType OutputType Comment Available
1031 PHENOTYPE Impetigo
4583 OUTCOME FindingOfVomiting Case finding Dichotomous Curated for use as Adverse Event Indicator
4582 OUTCOME FindingOfNausea Case finding Dichotomous Curated for use as Adverse Event Indicator
4691 OUTCOME Pericarditis Case finding Dichotomous Curated for use as Adverse Event Indicator
4581 OUTCOME FindingOfDiarrhoea Case finding Dichotomous Curated for use as Adverse Event Indicator
4690 OUTCOME BacterialVaginosis Case finding Dichotomous Curated for use as Adverse Event Indicator
1063 PHENOTYPE Tonsillitis and acute Pharyngitis
4608 OUTCOME Anaphylaxis Case finding Dichotomous Curated for use as Adverse Event Indicator
4588 OUTCOME FindingOfHeadache Case finding Dichotomous Curated for use as Adverse Event Indicator
1060 PHENOTYPE Herpes Zoster
1037 PHENOTYPE Herpes Simplex
1046 PHENOTYPE Urinary Tract Infections
1006 PHENOTYPE Intestinal Infectious Diseases
4689 OUTCOME FindingOfTinnitus Case finding Dichotomous Curated for use as Adverse Event Indicator
4688 OUTCOME BenignIntracranialHypertension Case finding Dichotomous Curated for use as Adverse Event Indicator
4687 OUTCOME FindingOfPsychomotorAgitation Case finding Dichotomous Curated for use as Adverse Event Indicator
4686 OUTCOME FindingOfHallucinations Case finding Dichotomous Curated for use as Adverse Event Indicator
4685 OUTCOME FindingOfExtraPyramidalMovements Case finding Dichotomous Curated for use as Adverse Event Indicator
4684 OUTCOME Delirium Case finding Dichotomous Curated for use as Adverse Event Indicator
4683 OUTCOME FindingOfCloudedConsciousness Case finding Dichotomous Curated for use as Adverse Event Indicator
4682 OUTCOME Angioedema Case finding Dichotomous Curated for use as Adverse Event Indicator
4681 OUTCOME UlcerOfOesphagus Case finding Dichotomous Curated for use as Adverse Event Indicator
4680 OUTCOME Oesophagitis Case finding Dichotomous Curated for use as Adverse Event Indicator
4679 OUTCOME Pancreatitis Case finding Dichotomous Curated for use as Adverse Event Indicator
4678 OUTCOME ClostridiumDifficileDiarrhoea Case finding Dichotomous Curated for use as Adverse Event Indicator
4677 OUTCOME FindingOfAbdominalPain Case finding Dichotomous Curated for use as Adverse Event Indicator
4676 OUTCOME HepaticFailure Case finding Dichotomous Curated for use as Adverse Event Indicator
4675 OUTCOME ChoestaticJaundiceSyndrome Case finding Dichotomous Curated for use as Adverse Event Indicator
4674 OUTCOME ToxicLiverDisease Case finding Dichotomous Curated for use as Adverse Event Indicator
1056 PHENOTYPE Viral Hepatitis
1061 PHENOTYPE Infectious Mononucleosis
1066 PHENOTYPE Peripheral Nervous Disease
1044 PHENOTYPE Whooping Cough
1036 PHENOTYPE Pleurisy
1001 PHENOTYPE Symptoms involving musculoskeletal
1038 PHENOTYPE Symptoms involving Skin and Integument Tissues
4182 EXPOSURE Influenza vaccination administered by third party Vaccination Dichotomous Administration codes
4183 EXPOSURE Influenza vaccination administered Vaccination Dichotomous Administration codes
4186 EXPOSURE Flu vac 20: QIVe: Sanofi Pasteur Drug Vaccination Dichotomous dm+d codes
4187 EXPOSURE Flu vac 20: LAIV: AstraZeneca – Fluenz Tetra Drug Vaccination Dichotomous dm+d codes
4188 EXPOSURE Flu vac 20: QIVe: GSK – Fluarix Tetra Drug Vaccination Dichotomous dm+d codes
4189 EXPOSURE Flu vac 20: QIVe: Mylan – Influenza Vacc Tetra MYL Drug Vaccination Dichotomous dm+d codes
4190 EXPOSURE Flu vac 20: QIVe: Mylan – Influvac sub-unit Drug Vaccination Dichotomous dm+d codes
4191 EXPOSURE Flu vac 20: QIVc: Seqirus – Flucelvax Tetra Drug Vaccination Dichotomous dm+d codes
4192 EXPOSURE Flu vac 20: aTIV: Seqirus – Fluad Drug Vaccination Dichotomous dm+d codes
4193 EXPOSURE Flu vac 20: TIV-HD: Sanofi Pasteur Drug Vaccination Dichotomous dm+d codes
4194 EXPOSURE Flu vac 20: QIVe: MASTA Drug Vaccination Dichotomous dm+d codes
4198 EXPOSURE Flu vac 20: aTIV: Generic Drug Vaccination Dichotomous dm+d codes
4661 OUTCOME HaemolyticAnaemia Case finding Dichotomous Curated for use as Adverse Event Indicator
4660 OUTCOME FindingOfHaemolysis Case finding Dichotomous Curated for use as Adverse Event Indicator
4665 OUTCOME FindingOfLeucopenia Case finding Dichotomous Curated for use as Adverse Event Indicator
4664 OUTCOME BoneMarrowDepression Case finding Dichotomous Curated for use as Adverse Event Indicator
4663 OUTCOME AplasticAnaemia Case finding Dichotomous Curated for use as Adverse Event Indicator
4662 OUTCOME Agranulocytosis Case finding Dichotomous Curated for use as Adverse Event Indicator
4673 OUTCOME Henoch-SchonleinPurpura Case finding Dichotomous Curated for use as Adverse Event Indicator
4672 OUTCOME ItchingOfSkin Case finding Dichotomous Curated for use as Adverse Event Indicator
4671 OUTCOME ErythemaMultiforme Case finding Dichotomous Curated for use as Adverse Event Indicator
4670 OUTCOME DrugReactionWithEosinophiliaAndSystemicSymptoms Case finding Dichotomous Curated for use as Adverse Event Indicator
4669 OUTCOME LyellSyndrome Case finding Dichotomous Curated for use as Adverse Event Indicator
4668 OUTCOME Stevens-JohnsonSyndrome Case finding Dichotomous Curated for use as Adverse Event Indicator
4667 OUTCOME ThrombocytopenicDisorder Case finding Dichotomous Curated for use as Adverse Event Indicator
4666 OUTCOME FindingOfNeutropenia Case finding Dichotomous Curated for use as Adverse Event Indicator
4584 OUTCOME FindingOfDrowsiness Case finding Dichotomous Curated for use as Adverse Event Indicator
4585 OUTCOME FindingOfFatigue Case finding Dichotomous Curated for use as Adverse Event Indicator
4586 OUTCOME FindingOfIrritability Case finding Dichotomous Curated for use as Adverse Event Indicator
4587 OUTCOME FindingOfMalaise Case finding Dichotomous Curated for use as Adverse Event Indicator
4589 OUTCOME FindingOfLocalisedErythema Case finding Dichotomous Curated for use as Adverse Event Indicator
4590 OUTCOME Arthropathy Case finding Dichotomous Curated for use as Adverse Event Indicator
4591 OUTCOME FindingOfMyalgia Case finding Dichotomous Curated for use as Adverse Event Indicator
4592 OUTCOME GuillainBarrieSyndrome Case finding Dichotomous Curated for use as Adverse Event Indicator
4593 OUTCOME FindingOfPeripheralTremor Case finding Dichotomous Curated for use as Adverse Event Indicator
4594 OUTCOME Seizure Case finding Dichotomous Curated for use as Adverse Event Indicator
4595 OUTCOME FebrileConvulsion Case finding Dichotomous Curated for use as Adverse Event Indicator
4596 OUTCOME BellsPalsy Case finding Dichotomous Curated for use as Adverse Event Indicator
4597 OUTCOME EruptionOfSkin Case finding Dichotomous Curated for use as Adverse Event Indicator
4598 OUTCOME Conjunctivitis Case finding Dichotomous Curated for use as Adverse Event Indicator
4599 OUTCOME CommonCold Case finding Dichotomous Curated for use as Adverse Event Indicator
4600 OUTCOME FindingOfCough Case finding Dichotomous Curated for use as Adverse Event Indicator
4601 OUTCOME BleedingFromNose Case finding Dichotomous Curated for use as Adverse Event Indicator
4602 OUTCOME FindingOfHoarseness Case finding Dichotomous Curated for use as Adverse Event Indicator
4603 OUTCOME FindingOfNasalCongestion Case finding Dichotomous Curated for use as Adverse Event Indicator
4604 OUTCOME FindingOfPainfulMouth Case finding Dichotomous Curated for use as Adverse Event Indicator
4605 OUTCOME FindingOfSoreThroat Case finding Dichotomous Curated for use as Adverse Event Indicator
4606 OUTCOME FindingOfNasalDischarge Case finding Dichotomous Curated for use as Adverse Event Indicator
4607 OUTCOME FindingOfWheezing Case finding Dichotomous Curated for use as Adverse Event Indicator
4609 OUTCOME FindingOfOedemaOfFace Case finding Dichotomous Curated for use as Adverse Event Indicator
4610 OUTCOME HypersensitivityReaction Case finding Dichotomous Curated for use as Adverse Event Indicator
1068 PHENOTYPE Measles Case finding Dichotomous For weekly reports. Limited to concepts with disorder semantic tag
1042 PHENOTYPE Scabies Case finding Dichotomous For weekly reports. Limited to concepts with disorder semantic tag
1048 PHENOTYPE Non-infective Enteritis and Colitis Case finding Dichotomous For weekly reports. Limited to concepts with disorder semantic tag
1028 PHENOTYPE Symptoms involving Respiratory and Chest Symptom Dichotomous For weekly reports. Based specifically on ICD R05-R07, R09
1054 PHENOTYPE Sinusitis Case finding Dichotomous For weekly reports. Limited to concepts with disorder semantic tag
1045 PHENOTYPE Meningitis and Encephalitis Case finding Dichotomous For weekly reports. Limited to concepts with disorder semantic tag
1022 PHENOTYPE Respiratory System Diseases Case finding Dichotomous For weekly reports. Limited to concepts with disorder semantic tag
1003 PHENOTYPE Laryngitis and Tracheitis Case finding Dichotomous For weekly reports. Limited to concepts with disorder semantic tag
1005 PHENOTYPE Strep Throat and Peritonsillar Abscess Case finding Dichotomous For weekly reports. Limited to concepts with disorder semantic tag
1067 PHENOTYPE Bullous Dermatoses Case finding Dichotomous For weekly reports. Excludes simple blisters traumatic and otherwise. Limited to concepts with disorder semantic tag
1035 PHENOTYPE Conjunctival Disorders Case finding Dichotomous For weekly reports. Limited to concepts with disorder semantic tag
4180 EXPOSURE InfluenzaVaccinesPrescribableWithinGPQOF Drug Vaccination Dichotomous dm+d codes. Taken from QOF RefsetID 12465201000001105
1062 PHENOTYPE Skin and Subcutaneous Tissue Infections Case finding Dichotomous For weekly reports. Limited to concepts with disorder semantic tag
4202 OUTCOME Influenza vaccination declined Vaccination Dichotomous Admin codes
4203 OUTCOME Influenza vaccination DNA Vaccination Dichotomous Admin codes
1018 PHENOTYPE Otitis Media Acute Case finding Dichotomous For weekly reports limited to disorders
4580 OUTCOME FindingOfDecreaseInAppetite Case finding Dichotomous Curated for use as Adverse Event Indicator
1058 PHENOTYPE Bronchitis Case finding Dichotomous For weekly reports. Limited to concepts with disorder semantic tag
1020 PHENOTYPE Influenza-like illness Case finding Dichotomous For weekly reports. Limited to concepts with disorder semantic tag
1055 PHENOTYPE Lower Respiratory Tract Infections Case finding Dichotomous For weekly reports. Limited to concepts with disorder semantic tag
1007 PHENOTYPE Upper Respiratory Tract Infections Case finding Dichotomous For weekly reports. Limited to concepts with disorder semantic tag
1057 PHENOTYPE Allergic Rhinitis Case finding Dichotomous For weekly reports. Limited to concepts with disorder semantic tag
1052 PHENOTYPE Pneumonia and Pneumonitis Case finding Dichotomous For weekly reports. Limited to concepts with disorder semantic tag
1008 PHENOTYPE Asthma Case finding Dichotomous For weekly reports. Limited to concepts with disorder semantic tag
1021 PHENOTYPE Rubella Case finding Dichotomous For weekly reports. Limited to concepts with disorder semantic tag
1030 PHENOTYPE Mumps Case finding Dichotomous For weekly reports. Limited to concepts with disorder semantic tag
1011 PHENOTYPE Chickenpox Case finding Dichotomous For weekly reports. Limited to concepts with disorder semantic tag
Mental Health Theme
General inclusions/exclusions and population covariates:

People will be included in cohorts who have a least one year’s historic data in their records.
Age will be represented as year or birth
Ethnicity will be listed in five categories (we can conduct multiple imputation for missing data)
IMD provided at LSOA level to individual records, derived from postcode. Where missing we substitute the practice cohort. Plus provided in quintiles (quintile 1 most deprived)
Household size (N.B. Relies on identical address & registered with same practice)
Urban, town and city, conurbation (ONS population density)
NHS Region – North, Midlands and East, South and London.
Registration will be full registration and not include temporary residents
We will include a practice indicator
We will exclude records where: no valid age or gender, no agreement to share data (approx. 0.2%)
MENTAL HEALTH THEME TEMPLATE
(NEXUS 365 ACCESS REQUIRED)
RAG ConditionID Category ConditionName VariableType OutputType Comment Available
4179 PHENOTYPE AcutePolymorphicPsychoticDisWoSympOfSchizophrenia Case finding Dichotomous
4420 PHENOTYPE RecurrentManicEpisodes Case finding Dichotomous
4421 PHENOTYPE ManiaWithPsychoticFeatures Case finding Dichotomous
4422 PHENOTYPE ManiaWithMood-congruentPsychoticFeatures Case finding Dichotomous
4423 PHENOTYPE ManiaWithMood-incongruentPsychoticFeatures Case finding Dichotomous
4424 PHENOTYPE BipolarIDisorderMostRecentEpisodeHypomanic Case finding Dichotomous
4425 PHENOTYPE BipolarAffectiveDisorderCurrentEpisodeManic Case finding Dichotomous
4426 PHENOTYPE BipolarAffectiveDisorderCurrentEpisodeDepression Case finding Dichotomous
4427 PHENOTYPE BipolarAffectiveDisorderCurrentEpisodeMixed Case finding Dichotomous
4429 PHENOTYPE MildMajorDepressionSingleEpisode Case finding Dichotomous
4430 PHENOTYPE ModerateMajorDepressionSingleEpisode Case finding Dichotomous
4431 PHENOTYPE ModeratelySevereMajorDepressionSingleEpisode Case finding Dichotomous
4432 PHENOTYPE SingleMajorDepressiveEpisodeSevereWithPsychosis Case finding Dichotomous
4433 PHENOTYPE MildRecurrentMajorDepression Case finding Dichotomous
4434 PHENOTYPE ModerateRecurrentMajorDepression Case finding Dichotomous
4486 PHENOTYPE InhibitedFemaleOrgasm Case finding Dichotomous
4487 PHENOTYPE InhibitedMaleOrgasm Case finding Dichotomous
4488 PHENOTYPE LifelongGeneralisedAnorgasmia Case finding Dichotomous
4489 PHENOTYPE LifelongSituationalAnorgasmia Case finding Dichotomous
4490 PHENOTYPE LifelongGeneralisedEarlyEjaculation Case finding Dichotomous
4491 PHENOTYPE LifelongSituationalEarlyEjaculation Case finding Dichotomous
4558 PHENOTYPE Non-organicContinuousEncopresis Case finding Dichotomous
4559 PHENOTYPE Non-organicDiscontinuousEncopresis Case finding Dichotomous
4560 PHENOTYPE DevelopmentalDelayInFeeding Case finding Dichotomous
4561 PHENOTYPE Non-organicInfantFeedingDisturbance Case finding Dichotomous
4566 PHENOTYPE IntentionalPoisoningByDrug Case finding Dichotomous
4567 PHENOTYPE IntentionalPoisoning Case finding Dichotomous
4568 PHENOTYPE IntentionallyHarmingSelf Case finding Dichotomous
4575 PHENOTYPE BPDMostRecentEpisodeManicSevereWithPsychosis Case finding Dichotomous
4392 PHENOTYPE HarmfulUseOfAlcohol Case finding Dichotomous
4393 PHENOTYPE HarmfulUseOfOpioid Case finding Dichotomous
4394 PHENOTYPE HarmfulUseOfCannabis Case finding Dichotomous
4395 PHENOTYPE HarmfulUseOfSyntheticCannabinoid Case finding Dichotomous
4396 PHENOTYPE HarmfulUseOfHypnotic Case finding Dichotomous
4397 PHENOTYPE HarmfulUseOfCocaine Case finding Dichotomous
4398 PHENOTYPE HarmfulUseOfHallucinogen Case finding Dichotomous
4403 PHENOTYPE Post-schizophrenicDepression Case finding Dichotomous
4613 PHENOTYPE DementiaWithEpilepsy Case finding Dichotomous
4614 PHENOTYPE FrontotemporalDementia Case finding Dichotomous
4615 PHENOTYPE DementiaWithHepatolenticularDegeneration Case finding Dichotomous
4616 PHENOTYPE DementiaDueToHypercalcaemia Case finding Dichotomous
4618 PHENOTYPE DementiaDueToIntoxication Case finding Dichotomous
4619 PHENOTYPE DementiaDueToMultipleSclerosis Case finding Dichotomous
4620 PHENOTYPE DementiaDueToNeurosyphilis Case finding Dichotomous
4625 PHENOTYPE DementiaDueToTraumaticBrainInjury Case finding Dichotomous
4628 PHENOTYPE AcuteSubacuteBrainSyndrome Case finding Dichotomous
4630 PHENOTYPE AcuteSubacuteInfectivePsychosis Case finding Dichotomous
4633 PHENOTYPE DeliriumOfMixedEtiology Case finding Dichotomous
4634 PHENOTYPE DeliriumSuperimposedOnDementia Case finding Dichotomous
4635 PHENOTYPE Sundowning Case finding Dichotomous
4638 PHENOTYPE ParanoidDisorder Case finding Dichotomous
4639 PHENOTYPE Paraphrenia Case finding Dichotomous
4640 PHENOTYPE AcuteParanoidReaction Case finding Dichotomous
4643 PHENOTYPE PremenstrualDysphoricDisorder Case finding Dichotomous
4644 PHENOTYPE DisruptiveMoodDysregulationDisorder Case finding Dichotomous
4647 PHENOTYPE Androphobia Case finding Dichotomous
4648 PHENOTYPE Gynephobia Case finding Dichotomous
4649 PHENOTYPE AdjustmentDisorder Case finding Dichotomous
4650 PHENOTYPE PsychogenicDysmenorrhea Case finding Dichotomous
4651 PHENOTYPE PsychogenicDysphagia Case finding Dichotomous
4652 PHENOTYPE PsychogenicPruritis Case finding Dichotomous
4653 PHENOTYPE PsychogenicTorticollis Case finding Dichotomous
4654 PHENOTYPE SomatoformAutonomicDysfunction Case finding Dichotomous
4655 PHENOTYPE TeethGrinding Case finding Dichotomous
4656 PHENOTYPE PseudobulbarAffect Case finding Dichotomous
4657 PHENOTYPE NightmareDisorder Case finding Dichotomous
4658 PHENOTYPE SexualAversionDisorder Case finding Dichotomous
4659 PHENOTYPE IntermittentExplosiveDisorder Case finding Dichotomous
4565 PHENOTYPE Cluttering Case finding Dichotomous
4563 PHENOTYPE StereotypyHabitDisorder Case finding Dichotomous
4562 PHENOTYPE PicaOfInfancyAndChildhood Case finding Dichotomous
4557 PHENOTYPE UrinaryIncontinenceOfNon-organicOrigin Case finding Dichotomous
4564 PHENOTYPE Stammering Case finding Dichotomous
4556 PHENOTYPE GillesDeLaTourettesSyndrome Case finding Dichotomous
4554 PHENOTYPE ChronicMotorTicDisorder Case finding Dichotomous
4553 PHENOTYPE TransientTicDisorder Case finding Dichotomous
4549 PHENOTYPE SiblingJealousy Case finding Dichotomous
4550 PHENOTYPE ElectiveMutism Case finding Dichotomous
4551 PHENOTYPE ReactiveAttachmentDisorder Case finding Dichotomous
4552 PHENOTYPE ChildhoodDisinhibitedAttachmentDisorder Case finding Dichotomous
4475 PHENOTYPE Pica Case finding Dichotomous
4548 PHENOTYPE ChildhoodPhobicAnxietyDisorder Case finding Dichotomous
4547 PHENOTYPE SeparationAnxietyDisorderOfChildhood Case finding Dichotomous
4546 PHENOTYPE DepressiveConductDisorder Case finding Dichotomous
4545 PHENOTYPE OppositionalDefiantDisorder Case finding Dichotomous
4544 PHENOTYPE ConductDisorder-Unsocialised Case finding Dichotomous
4543 PHENOTYPE SocialisedBehaviourDisorder Case finding Dichotomous
4541 PHENOTYPE AttentionDeficitHyperactivityDisorder Case finding Dichotomous
4542 PHENOTYPE HyperkineticConductDisorder Case finding Dichotomous
4540 PHENOTYPE AspergersDisorder Case finding Dichotomous
4539 PHENOTYPE RettsDisorder Case finding Dichotomous
4537 PHENOTYPE AutisticDisorderOfChildhoodOnset Case finding Dichotomous
4535 PHENOTYPE MixedDisorderOfScholasticSkills Case finding Dichotomous
4534 PHENOTYPE Aphasia-angularGyrusSyndrome Case finding Dichotomous
4533 PHENOTYPE Dyscalculia Case finding Dichotomous
4532 PHENOTYPE SpecificSpellingDisorder Case finding Dichotomous
4530 PHENOTYPE SpecificReadingDisorder Case finding Dichotomous
4529 PHENOTYPE Lisping Case finding Dichotomous
4528 PHENOTYPE AcquiredEpilepticAphasia Case finding Dichotomous
4526 PHENOTYPE ReceptiveLanguageDisorder Case finding Dichotomous
4524 PHENOTYPE ExpressiveLanguageDisorder Case finding Dichotomous
4523 PHENOTYPE DevelopmentalArticulationDisorder Case finding Dichotomous
4514 PHENOTYPE MunchausensSyndrome Case finding Dichotomous
4513 PHENOTYPE Trichotillomania Case finding Dichotomous
4512 PHENOTYPE Kleptomania Case finding Dichotomous
4511 PHENOTYPE Pyromania Case finding Dichotomous
4510 PHENOTYPE CompulsiveGambling Case finding Dichotomous
4509 PHENOTYPE PsychoneuroticPersonalityDisorder Case finding Dichotomous
4508 PHENOTYPE PassiveAggressivePersonalityDisorder Case finding Dichotomous
4507 PHENOTYPE NarcissisticPersonalityDisorder Case finding Dichotomous
4506 PHENOTYPE ImmaturePersonalityDisorder Case finding Dichotomous
4505 PHENOTYPE EccentricPersonalityDisorder Case finding Dichotomous
4504 PHENOTYPE DependentPersonalityDisorder Case finding Dichotomous
4503 PHENOTYPE AvoidantPersonalityDisorder Case finding Dichotomous
4502 PHENOTYPE ObsessiveCompulsivePersonalityDisorder Case finding Dichotomous
4501 PHENOTYPE HistrionicPersonalityDisorder Case finding Dichotomous
4500 PHENOTYPE EmotionallyUnstablePersonalityDisorder Case finding Dichotomous
4499 PHENOTYPE AntisocialPersonalityDisorder Case finding Dichotomous
4498 PHENOTYPE SchizoidPersonalityDisorder Case finding Dichotomous
4497 PHENOTYPE ParanoidPersonalityDisorder Case finding Dichotomous
4496 PHENOTYPE PostpartumPsychosis Case finding Dichotomous
4495 PHENOTYPE PostpartumDepression Case finding Dichotomous
4494 PHENOTYPE ExcessiveSexualDrive Case finding Dichotomous
4493 PHENOTYPE PsychologicDyspareunia Case finding Dichotomous
4492 PHENOTYPE PsychologicVaginismus Case finding Dichotomous
4485 PHENOTYPE PsychogenicImpotence Case finding Dichotomous
4484 PHENOTYPE PrimaryErectileDysfunction Case finding Dichotomous
4483 PHENOTYPE FemaleSexualArousalDisorder Case finding Dichotomous
4482 PHENOTYPE Anhedonia Case finding Dichotomous
4481 PHENOTYPE LackOrLossOfSexualDesire Case finding Dichotomous
4480 PHENOTYPE SleepTerrorDisorder Case finding Dichotomous
4479 PHENOTYPE SleepWalkingDisorder Case finding Dichotomous
4478 PHENOTYPE Non-organicDisorderOfTheSleep-wakeSchedule Case finding Dichotomous
4477 PHENOTYPE PrimaryHypersomnia Case finding Dichotomous
4476 PHENOTYPE NonorganicInsomnia Case finding Dichotomous
4464 PHENOTYPE NeurocirculatoryAsthenia Case finding Dichotomous
4465 PHENOTYPE Psychalgia Case finding Dichotomous
4466 PHENOTYPE Depersonalisation-derealisationSyndrome Case finding Dichotomous
4467 PHENOTYPE Dhat Case finding Dichotomous
4468 PHENOTYPE PsychasthenicNeurosis Case finding Dichotomous
4469 PHENOTYPE PsychogenicSyncope Case finding Dichotomous
4470 PHENOTYPE OccupationalNeurosis Case finding Dichotomous
4471 PHENOTYPE AnorexiaNervosa Case finding Dichotomous
4472 PHENOTYPE AtypicalAnorexiaNervosa Case finding Dichotomous
4473 PHENOTYPE BulimiaNervosa Case finding Dichotomous
4474 PHENOTYPE AtypicalBulimiaNervosa Case finding Dichotomous
4448 PHENOTYPE PsychogenicAmnesia Case finding Dichotomous
4449 PHENOTYPE PsychogenicFugue Case finding Dichotomous
4450 PHENOTYPE DissociativeStupor Case finding Dichotomous
4451 PHENOTYPE DissociativeTrance Case finding Dichotomous
4452 PHENOTYPE DissociativeMotorDisorder Case finding Dichotomous
4453 PHENOTYPE DissociativeConvulsions Case finding Dichotomous
4454 PHENOTYPE DissociativeAnaesthesia Case finding Dichotomous
4455 PHENOTYPE PsychologicConversionDisorder Case finding Dichotomous
4456 PHENOTYPE GanserSyndrome Case finding Dichotomous
4457 PHENOTYPE MultiplePersonalityDisorder Case finding Dichotomous
4458 PHENOTYPE BriquetsSyndrome Case finding Dichotomous
4459 PHENOTYPE UndifferentiatedSomatoformDisorder Case finding Dichotomous
4460 PHENOTYPE BodyDysmorphicDisorder Case finding Dichotomous
4461 PHENOTYPE IllnessAnxietyDisorder Case finding Dichotomous
4462 PHENOTYPE CutaneousHypochondriasis Case finding Dichotomous
4446 PHENOTYPE Acute stress disorder Case finding Dichotomous
4444 PHENOTYPE GeneralisedAnxietyDisorder Case finding Dichotomous
4447 PHENOTYPE PosttraumaticStressDisorder Case finding Dichotomous
4443 PHENOTYPE PanicDisorder Case finding Dichotomous
4435 PHENOTYPE Cyclothymia Case finding Dichotomous
4436 PHENOTYPE Dysthymia Case finding Dichotomous
4437 PHENOTYPE Agoraphobia Case finding Dichotomous
4438 PHENOTYPE SocialPhobia Case finding Dichotomous
4439 PHENOTYPE Acrophobia Case finding Dichotomous
4440 PHENOTYPE Zoophobia Case finding Dichotomous
4441 PHENOTYPE Claustrophobia Case finding Dichotomous
4442 PHENOTYPE SimplePhobia Case finding Dichotomous
4418 PHENOTYPE Hypomania Case finding Dichotomous
4428 PHENOTYPE BipolarIIDisorder Case finding Dichotomous
4413 PHENOTYPE SharedParanoidDisorder Case finding Dichotomous
4414 PHENOTYPE InducedPsychoticDisorder Case finding Dichotomous
4416 PHENOTYPE SchizoaffectiveDisorderDepressiveType Case finding Dichotomous
4417 PHENOTYPE SchizoaffectiveDisorderMixedType Case finding Dichotomous
4411 PHENOTYPE ParanoiaQuerulans Case finding Dichotomous
4410 PHENOTYPE InvolutionalParanoidState Case finding Dichotomous
4409 PHENOTYPE DelusionalDysmorphophobia Case finding Dichotomous
4405 PHENOTYPE SimpleSchizophrenia Case finding Dichotomous
4404 PHENOTYPE ResidualSchizophrenia Case finding Dichotomous
4402 PHENOTYPE UndifferentiatedSchizophrenia Case finding Dichotomous
4401 PHENOTYPE CatatonicSchizophrenia Case finding Dichotomous
4400 PHENOTYPE DisorganisedSchizophrenia Case finding Dichotomous
4399 PHENOTYPE ParanoidSchizophrenia Case finding Dichotomous
4370 PHENOTYPE DementiaDueToPicksDisease Case finding Dichotomous
4371 PHENOTYPE DementiaDueToCreutzfeldtJakobDisease Case finding Dichotomous
4372 PHENOTYPE DementiaDueToHuntingtonChorea Case finding Dichotomous
4373 PHENOTYPE DementiaDueToParkinsonsDisease Case finding Dichotomous
4374 PHENOTYPE DementiaAssociatedWithAIDS Case finding Dichotomous
4380 PHENOTYPE OrganicDissociativeDisorder Case finding Dichotomous
4381 PHENOTYPE OrganicEmotionallyLabileDisorder Case finding Dichotomous
4383 PHENOTYPE PostencephaliticMyoclonus Case finding Dichotomous
4515 PHENOTYPE MildLearningDisability Case finding Dichotomous
4517 PHENOTYPE ModerateLearningDisability Case finding Dichotomous
4519 PHENOTYPE SevereLearningDisability Case finding Dichotomous
4521 PHENOTYPE ProfoundLearningDisability Case finding Dichotomous
4385 PHENOTYPE AlcoholIntoxication Case finding Dichotomous
4386 PHENOTYPE OpioidIntoxication Case finding Dichotomous
4387 PHENOTYPE CannabisIntoxication Case finding Dichotomous
4388 PHENOTYPE HypnoticIntoxication Case finding Dichotomous
4389 PHENOTYPE CocaineIntoxication Case finding Dichotomous
4390 PHENOTYPE StimulantIntoxication Case finding Dichotomous
4391 PHENOTYPE HallucinogenIntoxication Case finding Dichotomous
4412 PHENOTYPE AcuteSchizophrenia-likePsychoticDisorder Case finding Dichotomous
4369 PHENOTYPE VascularDementia Case finding Dichotomous
4375 PHENOTYPE OrganicHallucinosis Case finding Dichotomous
4376 PHENOTYPE OrganicCatatonicDisorder Case finding Dichotomous
4377 PHENOTYPE OrganicDelusionalDisorder Case finding Dichotomous
4378 PHENOTYPE OrganicMoodDisorder Case finding Dichotomous
4379 PHENOTYPE OrganicAnxietyDisorder Case finding Dichotomous
4382 PHENOTYPE OrganicPersonalityDisorder Case finding Dichotomous
4384 PHENOTYPE PostconcussionSyndrome Case finding Dichotomous
4407 PHENOTYPE SchizotypalPersonalityDisorder Case finding Dichotomous
4415 PHENOTYPE SchizoaffectiveDisorderManicType Case finding Dichotomous
4419 PHENOTYPE ManicDisorderSingleEpisode Case finding Dichotomous
4445 PHENOTYPE Obsessive-compulsiveDisorder Case finding Dichotomous
4642 PHENOTYPE AtypicalDepression
4576 PHENOTYPE PsychosisAndSevereDepressionWithAndDueToBPD
4617 PHENOTYPE DementiaDueToHypothyroidism
4574 PHENOTYPE AcutePolymorphicPsychoticDisWiSympOfSchizophrenia
4624 PHENOTYPE DementiaDueToSLE
4527 PHENOTYPE DevelopmentalReceptiveLanguageDisorder
4699 PHENOTYPE DomesticAbuse
4636 PHENOTYPE VolatileSolventIntoxication
4627 PHENOTYPE DementiaDueToVitaminBDeficiency
4579 PHENOTYPE SevereRecurrentMajorDepressionWithPsychoticFeature
4702 PHENOTYPE DomesticAbuseOfAdult
4645 PHENOTYPE NaturalEnvironmentTypePhobia
4516 PHENOTYPE MildIntellectualDisability
4536 PHENOTYPE DCD-DevelopmentalCoordinationDisorder
4622 PHENOTYPE DementiaDueToPolyarteritisNodosa
4611 PHENOTYPE DementiaWithLewyBodies
4631 PHENOTYPE AcuteSubacuteOrganicReaction
4525 PHENOTYPE DevelopmentalExpressiveLanguageDisorder
4522 PHENOTYPE ProfoundIntellectualDisability
4577 PHENOTYPE SevereMajorDepressiveDisWithAnxietySingleEpisode
4531 PHENOTYPE Dyslexia
4408 PHENOTYPE DelusionalDisorder
4700 PHENOTYPE DomesticEmotionalAbuse
4637 PHENOTYPE HarmfulUseOfVolatileSolvents
4518 PHENOTYPE ModerateIntellectualDisability
4538 PHENOTYPE AtypicalAutism
4698 PHENOTYPE VictimOfAbuse
4621 PHENOTYPE DementiaDueToNiacinDeficiency
4578 PHENOTYPE SevereRecurrentMajorDepression
4555 PHENOTYPE VocalTicDisorder
4701 PHENOTYPE DomesticSexualAbuse
4641 PHENOTYPE PyschogenicParanoidPsychosis
2070 PHENOTYPE DomesticViolence Case finding Dichotomous
4646 PHENOTYPE BloodInjuryInjectionTypePhobia
4612 PHENOTYPE DementiaWithParkinsonism
4632 PHENOTYPE AcuteSubacutePsychoOrganicSyndrome
4623 PHENOTYPE DementiaDueToPrionDisease
4520 PHENOTYPE SevereIntellectualDisability
4626 PHENOTYPE DementiaDueToTrypanosomiasis
4406 PHENOTYPE CoenesthopathicSchizophrenia
4629 PHENOTYPE AcuteSubacuteConfusionalState
4463 PHENOTYPE PsychogenicDyspepsia

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