RCGP RSC COVID-19 Observatory and Coding Guidelines

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Since the outbreak of COVID-19 in Wuhan, China, we have been working closely with Public Health England (PHE) and other national bodies to closely monitor and make plans to deal with any situation that may develop in the UK. A vital part of that will be to monitor the number of suspected COVID-19 cases in the community in a timely way. PHE has commissioned the RCGP Research Surveillance Centre to incorporate monitoring of COVID-19 into its virology surveillance scheme.

Please also refer to local guidance:

Visit the Center of Evidence-Based Medicine web page for evidence synthesis and dissemination to support the current COVID-19 pandemic

cebm-covid19-evidence-service-7670759

RCGP RSC COVID-19 Observatory

We now have an observatory to track Coronavirus (COVID-19, also known as 2019-nCov).
For this observatory to work, it is vital that practices code information correctly. Please see further details about coding below.

 

COVID-19 Observatory (Weekly return)
RCGP RSC Mortality Observatory

 

Mortality Observatory (Weekly return)
Recording essential information in General Practice – advice for all general practices – including all RCGP RSC general practices

Our guidelines for recording essential information related to COVID-19 can be downloaded below.

 

COVID-19 clinical flowchart with optimal SNOMED-CT codes

 

PROMPT CARD 1: Covid-19 coding advice for reception/triage team

 

PROMPT CARD 2: Advice for staff responsible for Covid-19 coding

 

PROMPT CARD 3: Coding for Covid-19 outcomes

 

FAQS related to COVID 19-serology, virology surveillance and episode type

Further advice published in BJGP Open:To monitor the COVID-19 pandemic we need better quality primary care data. Simon de Lusignan, John Williams – 16 Apr 2020

In ENGLAND, NHSE have now set up a PPE supply and distribution helpline. If you are experiencing shortages then you can contact 0800 915 9964 /0191 283 6543 or email: this service is operating 24/7.

FAQs related to COVID-19 Surveillance
If you have any questions, please check our FAQs prior to emailing the PLO team.
Ordering materials
We are no longer able to receive material requests through the PLO email account.
Could you kindly order materials using the link below, and ensure all fields are complete.

 

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COVID-19 ontology
Status Semantic tag SNOMED CT ConceptID Term
Definite Clinical finding 1240581000000104 SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) detected
Definite Situation 1300721000000109 COVID-19 confirmed by laboratory test
Definite Substance 1240391000000107 Antigen of severe acute respiratory syndrome coronavirus 2
Definite Substance 1240411000000107 Ribonucleic acid of severe acute respiratory syndrome coronavirus 2
Probable Disorder 1240751000000100 COVID-19
Probable Situation 1300731000000106 COVID-19 confirmed using clinical diagnostic criteria
Probable Disorder 1240561000000108 Encephalopathy caused by SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2)
Probable Disorder 1240571000000101 Gastroenteritis caused by severe acute respiratory syndrome coronavirus 2 (disorder)
Probable Disorder 1240531000000103 Myocarditis caused by SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2)
Probable Disorder 1240521000000100 Otitis media caused by SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2)
Probable Disorder 1240551000000105 Pneumonia caused by SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2)
Probable Disorder 1240541000000107 Infection of upper respiratory tract caused by severe acute respiratory syndrome coronavirus 2 (disorder)
Probable Disorder 186747009 Coronavirus infection
Possible Situation 1240761000000102 Suspected COVID-19
Possible procedure 1240451000000106 Telephone consultation for suspected severe acute respiratory syndrome coronavirus 2
Possible Situation 700217006 Suspected coronavirus infection
Possible Event 1240431000000104 Exposure to SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) infection
Possible Event 1240441000000108 Close exposure to SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) infection
Possible Procedure 1240471000000102 Measurement of severe acute respiratory syndrome coronavirus 2 antigen
Possible Procedure 1240511000000106 Detection of SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) using polymerase chain reaction technique
Possible Procedure 1320971000000102 Taking of swab for SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2)
Possible Situation 1321031000000105 Self-taken swab for SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) completed
Possible Situation 1321041000000101 Self-taken swab for SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) offered
Possible Situation 1321051000000103 Swab for SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) taken by healthcare professional
Excluded Clinical finding 1240591000000102 SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2) not detected
Excluded Situation 1321111000000101 COVID-19 excluded by laboratory test
Excluded Situation 1321101000000103 COVID-19 excluded
Excluded Situation 1321121000000107 COVID-19 excluded using clinical diagnostic criteria

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